You've probably not been using Bakin for long. There's an option to turn off 'snap to grid' for all objects and models so you can freely move them around to any spot/location on the map. At the bottom right where all the other buttons are its the button that looks like a horseshoe/magnet icon, turn that off, no blue line under it.. this should sort the issue out of the door not lining up.

Yeah, There isn't a lot of "good" documentation floating around and the community isn't as large as others in the some genre. Thanks. That does solve the grid issue. I do wish the doors could be fixed :/