Frequently visited locations should be in the middle of your base while the less frequently visited locations can spread out.

Make sure there is a relative easy path to walk through from one point in your base to another point, especially between two frequently visited locations.

For large bases, two essential mods are critical to your efficiency.

A mod that allows you to haul a LOT of stuff together. https://steamhost.cn/steamcommunity_com/sharedfiles/filedetails/?id=1279012058

A mod that makes your colonist prioritize nearby jobs so that they don't waste too much time walking long distances.
https://steamhost.cn/steamcommunity_com/sharedfiles/filedetails/?id=2784585275