If you want all modifications to appear, here a way to accomplish it:

Be advised that this method will probably require that you verify your game files if you want to remove my mod. Just putting back the original files in there ddn't work for me.

I made a whole playthrough using this method with every changes appearing 100% of the time.

Copy everything in this folder (where my mod should be located):
C:\...\Steam\steamapps\workshop\content\268500\2751802747\Localization\INT

Paste to overwrite in the following folder:
C:\...\steamapps\common\XCOM 2\XCom2-WarOfTheChosen\XComGame\Localization\INT

*replace 'C:\...\' with where Steam is installed on your computer.

Note: If you do not use this workaround, you are note likely to miss much: The skyranger name remains the same, the "Nickname" isn't replaced with "Codename", sometimes it says "Avenger" instead of "G.I.Joe Mobile HQ". At least, these are details that I observed while first testing it.

If you don't care about breaking the immersion, don't bother using this workaround. Personally, it bothered me and the workaround made the changes appear 100% of the time.